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Some applications of this product  may require a license which is not provided by the purchase of this product.

For research use only. 

Probe-based qPCR Mix optimized for amplifying multiple targets in a single reaction

Probe-based qPCR master mix that has been optimized for highly sensitive and accurate quantification of up to 4 targets in a single reaction. This master mix was developed for TaqMan® probes but is also suitable for other hydrolysis probe types

  • analyze 1-4 targets in 1 reaction
  • high specificity and sensitivity
  • robust amplification of GC-rich targets
  • contains dUTP to prevent cross-contamination when
    used in combination with UNG

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Catalog number

08-02-0000S

Quantity

€ 0.00

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Details

Overview

Description

HOT FIREPol® Multiplex qPCR Mix (ROX) is optimized for amplifying multiple targets in a single reaction in real-time quantitative PCR assays. The qPCR Mix comprises all the components necessary (except primers, probes and template) to perform qPCR: HOT FIREPol® DNA Polymerase, optimized buffer components, ultrapure dNTPs, MgCl2 and Purple passive reference dye according to system requirements.


HOT FIREPol® Multiplex qPCR Mix (ROX) is optimized for DNA hydrolysis probes based on the 5' flap endonuclease activity.


HOT FIREPol® DNA Polymerase is activated by a 10 min incubation step at 95°C. This prevents extension of non-specifically annealed primers and primer-dimers formed at low temperatures during qPCR setup.

Applications

  • detection and quantification of DNA and cDNA targets
  • profiling gene expression
  • microbial detection
  • viral load determination

Properties

Concentration: 5x

Hot-start: yes, initial activation in 10 min

Detection type: Probe-based

Reference dye: ROX

Suitable qPCR Cyclers: qPCR platforms from Applied Biosystems and Agilent/Stratagene. Check Your cycler!

Mix Components

HOT FIREPol® DNA Polymerase: chemically modified FIREPol® DNA Polymerase enabling hot-start

5x Multiplex qPCR buffer with 15 mM MgCl21x PCR solution – 3mM MgCl2

dNTPs including dUTP: the mix allows UNG treatment to prevent carryover contamination from previous runs.
IMPORTANT: UNG is not included in the HOT FIREPol® Multiplex qPCR Mix

ROX dye: If ROX, Texas Red, or similar dye is used as one of the fluorophores, ROX passive reference dye might interfere with the signal. A version without passive reference or with Purple reference dye is available.

Related Resources

Documents

    FAQ

    What is the difference between dye-based and probe-based systems?

    Dye-based detection (e.g., EvaGreen®, SolisGreen®, SYBR® Green) is a cost-effective qPCR option, as it requires only addition of PCR primers. However, the intercalating dye will detect any dsDNA (non-specific amplicons, primer dimers) produced in the reaction. Melt curve analysis performed after the qPCR can be used to verify the specificity of amplification and to check for the presence of non-specific amplification products.

    The probe-based qPCR system demonstrates higher specificity compared to dye-based qPCR, because probes only detect the gene of interest. Keep in mind that in probe-based assays, primer dimers and non-specific products will not be detected, however, they may compromise the PCR efficiency. Using probe-based qPCR system, it is possible to distinguish between sequences with high similarity (e.g. single-nucleotide variations). Additionally, probe-based qPCR assays allow for multiplex reactions in one tube, while only a single target can be amplified and measured in a dye-based qPCR.

    After first-strand cDNA synthesis, how much cDNA template should I use for my PCR?

    Recommended final amount of cDNA sample in downstream PCR reaction is up to one tenth of the final reaction volume. Overload of cDNA sample may compromise the downstream PCR, because cDNA sample may contain reaction components that may inhibit your PCR reaction.

    Why do certain kits contain a ROX?

    ROX (carboxy-X-rhodamine) is one of the passive reference dyes providing a constant fluorescent signal that is used for signal normalization during the amplification cycles. The emission recorded from a reference dye during the baseline cycles is used to normalize the emission recorded from the reporter (e.g. EvaGreen®, SolisGreen®, SYBR® Green, etc.) in later cycles in ROX-dependent real-time PCR systems (e.g. Applied Biosystems 5700, 7000, 7300, 7700, 7900HT, StepOne™, StepOnePlus™). Reference dye compensates for small fluorescent fluctuations and well-to-well variations that may occur.

    In Solis BioDyne qPCR mixes we use technology, based on ROX, that allows us to use same mix for high- and low- ROX requiering cyclers. 

    Please check cycler-mix compatibility here if not sure.

    What are the storage conditions and stability of Solis BioDyne reagents?

    Solis BioDyne products should be stored at -20°C.

    Shipping and temporary storage for up to 1 month at room temperature (*1525°C) has no detrimental effects on the quality of Solis BioDyne reagents.

    Freeze-thaw stability is tested for each product. Most PCR and qPCR products have passed 30 freeze-thaw cycles with no changes in performance. Specific information is found in Storage and Shipping conditions of each product.

    When stored and handled under the recommended conditions, full activity of the reagents is retained until the Expiry Date printed on the tube label.

    *World Health Organization (2003). Guidelines for the Storage of Essential Medicines and Other Health Commodities.

    Storage & Shipping
    Storage

    Routine storage: -20°C


    Temporary storage for up to 1 month at room temperature has no detrimental effects on the quality of HOT FIREPol® Multiplex qPCR Mix.

    Shipping

    At room temperature